Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013863.1 Corchorus capsularis cultivar CVL-1 contig13884, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21823

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
565--612
20
2.4
19
83
10
60
4
25
6
64
1.35
1021--1064
2
24.0
2
78
17
51
45
2
0
52
1.13
1171--1195
13
1.9
13
100
0
50
56
0
0
44
0.99
2201--2240
19
2.1
19
85
0
53
5
10
12
72
1.26
3180--3217
20
1.9
19
89
5
58
13
21
34
31
1.91
3489--3526
20
1.9
20
88
0
58
65
5
0
28
1.14
4621--4668
2
24.0
2
87
8
71
45
0
4
50
1.21
6798--6849
23
2.2
23
86
10
70
19
11
23
46
1.82
6807--6918
59
1.9
59
90
3
181
16
15
19
48
1.82
18817--18878
31
2.0
31
87
0
88
45
14
6
33
1.71
19087--19116
7
4.4
7
91
8
53
86
0
13
0
0.57
19087--19116
13
2.3
13
100
0
60
86
0
13
0
0.57

Tables:   1

The End!