Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013864.1 Corchorus capsularis cultivar CVL-1 contig13885, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16617

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5269--5299
2
15.5
2
100
0
62
51
0
0
48
1.00
5385--5411
14
1.9
14
100
0
54
29
0
33
37
1.58
7882--7939
26
2.2
26
96
0
107
41
8
13
36
1.76
11159--11211
16
3.6
16
72
25
53
50
0
0
49
1.00
11160--11291
39
3.3
40
70
22
102
50
1
1
46
1.19
11172--11283
28
4.1
28
72
17
92
52
1
1
43
1.22
11172--11291
43
2.8
41
71
20
100
51
1
1
45
1.21
11170--11286
13
9.2
13
71
22
81
52
1
1
44
1.21
16570--16598
14
2.0
15
93
6
51
48
24
0
27
1.51

Tables:   1

The End!