Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013870.1 Corchorus capsularis cultivar CVL-1 contig13891, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23951

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
608--640
17
1.9
17
93
0
57
36
15
3
45
1.61
1448--1481
14
2.4
14
95
0
59
91
0
8
0
0.43
2949--2979
16
1.9
16
93
0
53
35
9
0
54
1.33
3562--4870
201
6.6
201
89
3
1783
34
18
12
34
1.89
6970--7022
26
2.1
26
86
6
74
52
3
11
32
1.55
8130--8165
17
2.1
17
100
0
72
52
0
5
41
1.24
8991--9028
2
20.0
2
89
10
62
52
0
0
47
1.00
18141--18176
16
2.2
16
95
0
63
36
11
2
50
1.53

Tables:   1

The End!