Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013872.1 Corchorus capsularis cultivar CVL-1 contig13893, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3993

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
112--178
32
2.1
32
88
5
100
46
4
17
31
1.68
271--382
7
15.7
7
72
10
84
60
1
19
17
1.45
271--382
15
7.9
14
70
10
84
60
1
19
17
1.45
272--353
22
3.8
22
76
15
91
62
1
19
17
1.40
254--325
20
3.5
20
75
16
74
61
2
19
16
1.47
254--462
42
4.7
43
74
15
192
57
3
19
19
1.55
401--572
36
4.8
36
79
7
181
55
4
19
20
1.59
401--556
72
2.2
72
83
4
201
54
4
19
21
1.61
540--659
29
4.1
29
66
23
81
57
5
20
16
1.58
546--702
81
1.9
81
84
7
206
56
5
19
18
1.60
2920--3042
36
3.4
36
72
6
106
29
19
6
44
1.75
2929--3076
72
2.1
69
82
10
176
27
20
7
44
1.78

Tables:   1

The End!