Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013878.1 Corchorus capsularis cultivar CVL-1 contig13899, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23003

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
143--176
2
16.5
2
93
6
59
47
2
0
50
1.16
260--414
73
2.1
74
90
2
242
21
29
9
40
1.83
4172--4264
33
2.8
33
91
4
152
16
35
34
13
1.88
4360--4441
33
2.5
33
89
0
119
12
30
40
17
1.86
7836--7865
2
15.0
2
92
0
51
53
0
0
46
1.00
7969--8289
158
2.0
159
92
3
531
31
11
9
47
1.71
10693--10859
83
2.0
85
94
2
293
33
7
10
48
1.65
13354--13441
45
1.9
46
93
2
151
37
18
19
25
1.94
19349--19379
2
15.5
2
100
0
62
51
0
0
48
1.00
22729--22797
29
2.4
29
87
0
93
37
28
13
20
1.90

Tables:   1

The End!