Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013879.1 Corchorus capsularis cultivar CVL-1 contig13900, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23323

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5550--5611
32
2.0
31
90
3
97
41
19
9
29
1.83
5788--5813
2
13.0
2
100
0
52
50
0
0
50
1.00
6563--6596
2
17.0
2
100
0
68
50
0
0
50
1.00
7639--7692
24
2.2
24
93
0
90
11
20
44
24
1.83
8394--8424
15
2.1
15
100
0
62
54
12
6
25
1.62
8477--8513
19
1.9
19
94
0
65
45
24
5
24
1.74
10058--10294
105
2.3
105
86
4
318
33
16
18
31
1.93
15371--15607
105
2.3
105
86
4
318
33
16
18
31
1.93
22729--22754
13
2.0
13
100
0
52
15
0
15
69
1.20

Tables:   1

The End!