Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013881.1 Corchorus capsularis cultivar CVL-1 contig13902, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18725

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1974--2086
33
3.4
33
82
4
131
23
40
27
8
1.84
3683--3748
33
2.0
33
90
0
105
39
15
19
25
1.91
7109--7294
92
2.0
92
98
0
363
44
11
5
38
1.63
14181--15106
369
2.5
369
84
5
1161
31
15
16
36
1.90
14197--15106
183
4.9
185
83
4
1048
30
15
16
36
1.90
15541--15754
108
2.0
107
89
0
329
36
16
13
32
1.88
15806--16198
128
3.0
130
93
4
659
46
6
10
36
1.64
16230--16280
23
2.2
23
89
0
75
45
5
19
29
1.74
16258--16321
31
2.1
31
96
0
119
42
7
23
26
1.81

Tables:   1

The End!