Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013882.1 Corchorus capsularis cultivar CVL-1 contig13903, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26830

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1662--1754
33
2.8
33
83
8
109
16
30
39
13
1.87
3010--3051
21
2.0
20
86
4
57
40
11
21
26
1.88
11937--12001
30
2.2
30
91
0
103
12
43
13
30
1.81
11943--12006
18
3.9
17
71
24
57
12
45
12
29
1.79
12150--12206
18
3.2
18
82
0
69
57
12
0
29
1.35
12639--12672
15
2.3
15
94
0
59
38
0
23
38
1.55
13836--13914
30
2.5
32
81
12
99
16
10
27
45
1.79
20051--20163
33
3.4
33
82
6
140
7
27
41
23
1.82
26216--26328
33
3.4
33
81
6
131
8
27
40
23
1.84

Tables:   1

The End!