Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013889.1 Corchorus capsularis cultivar CVL-1 contig13910, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  55160

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8968--9014
2
26.0
2
76
20
50
46
0
0
53
1.00
8958--9013
24
2.3
24
87
6
78
41
0
0
58
0.98
8932--9013
11
7.1
12
72
13
64
37
1
1
59
1.13
8968--9008
13
3.2
13
80
16
50
46
0
0
53
1.00
10821--10887
6
12.0
6
81
9
54
0
2
17
79
0.86
10823--10887
22
3.0
21
84
4
67
0
3
16
80
0.85
10861--10887
8
3.4
8
100
0
54
0
0
11
88
0.50
16510--16539
14
2.1
14
100
0
60
26
13
23
36
1.92
24252--24358
53
2.0
55
88
5
164
39
13
10
37
1.78
24638--24676
14
2.7
14
88
4
51
0
56
0
43
0.99
26789--26820
6
5.2
6
96
3
55
46
3
31
18
1.65
31037--31074
14
2.7
14
88
8
51
2
13
26
57
1.49
41787--41827
20
2.1
20
95
4
75
58
4
4
31
1.40
45903--45959
24
2.4
24
85
5
80
22
31
26
19
1.98

Tables:   1

The End!