Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013892.1 Corchorus capsularis cultivar CVL-1 contig13913, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  44642

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7420--7748
166
2.0
166
93
2
563
40
17
15
26
1.89
16609--16637
2
14.5
2
100
0
58
48
0
0
51
1.00
17719--17760
22
1.9
22
95
0
75
26
23
7
42
1.80
17875--17910
18
1.9
19
94
5
65
50
8
8
33
1.63
39455--39506
27
1.9
27
84
0
68
32
11
13
42
1.80
44571--44607
2
18.5
2
100
0
74
51
0
0
48
1.00
44607--44642
2
18.0
2
100
0
72
50
0
50
0
1.00

Tables:   1

The End!