Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013893.1 Corchorus capsularis cultivar CVL-1 contig13914, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52965

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3487--3524
13
2.9
13
88
0
58
15
36
10
36
1.82
3527--3602
40
1.9
40
91
0
125
40
18
14
26
1.89
20847--20878
12
2.5
13
90
10
57
46
12
6
34
1.67
29416--29464
16
3.1
16
93
0
80
77
0
22
0
0.77
29420--29464
4
11.2
4
90
0
72
75
0
24
0
0.80
30847--30892
14
3.2
14
84
6
65
28
15
21
34
1.94
39471--39496
2
13.0
2
100
0
52
50
0
0
50
1.00
40235--40272
17
2.2
18
85
4
51
60
0
23
15
1.35
40903--41253
169
2.1
169
83
6
430
29
13
16
41
1.86

Tables:   1

The End!