Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013895.1 Corchorus capsularis cultivar CVL-1 contig13916, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24003

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
716--788
29
2.5
29
79
2
83
36
16
21
24
1.94
4407--4444
12
3.0
13
80
7
51
44
7
26
21
1.79
9156--9240
30
2.8
31
89
3
118
47
15
14
23
1.82
9213--9295
27
3.1
26
83
8
105
43
14
13
28
1.83
9499--9574
30
2.5
31
84
4
100
47
18
14
19
1.83
19649--19682
4
8.8
4
87
6
52
26
0
0
73
0.83

Tables:   1

The End!