Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013898.1 Corchorus capsularis cultivar CVL-1 contig13919, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6992

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
651--695
6
7.7
6
92
2
74
33
2
13
51
1.53
713--742
15
2.0
15
93
0
51
13
10
6
70
1.34
2989--4744
334
5.3
329
79
7
1528
33
13
15
37
1.87
5548--5572
3
8.3
3
100
0
50
0
0
32
68
0.90
6413--6480
16
4.3
16
83
3
93
39
39
14
5
1.71
6413--6472
31
1.9
31
93
0
102
41
40
13
5
1.66

Tables:   1

The End!