Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013901.1 Corchorus capsularis cultivar CVL-1 contig13922, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  46123

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3743--4015
143
1.9
144
94
2
487
30
5
18
45
1.72
8208--8246
21
1.9
20
89
5
60
79
0
20
0
0.73
12633--12717
41
2.1
41
100
0
170
28
9
21
41
1.84
29935--29964
12
2.5
12
100
0
60
33
0
10
56
1.32
34322--34347
2
13.0
2
100
0
52
50
0
0
50
1.00
35892--35920
2
15.0
2
92
7
51
48
0
0
51
1.00
39988--40018
2
15.5
2
100
0
62
51
0
0
48
1.00

Tables:   1

The End!