Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013907.1 Corchorus capsularis cultivar CVL-1 contig13928, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22940

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--223
48
4.7
48
83
5
276
19
31
15
33
1.93
1068--1113
12
4.0
12
88
11
78
6
26
41
26
1.80
1068--1113
22
2.0
24
91
8
78
6
26
41
26
1.80
1116--1170
21
2.6
21
85
0
74
10
32
27
29
1.91
11810--12209
201
2.0
201
96
0
739
32
13
20
33
1.92
12644--12690
23
2.0
23
100
0
94
34
23
8
34
1.85
13746--13791
2
22.5
2
91
4
74
47
0
4
47
1.21
17105--17129
12
2.1
12
100
0
50
0
16
32
52
1.44
21098--21235
33
4.2
33
80
5
127
26
10
21
42
1.84

Tables:   1

The End!