Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013916.1 Corchorus capsularis cultivar CVL-1 contig13937, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34425

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5--40
2
18.5
2
94
5
65
50
0
0
50
1.00
4855--4916
31
2.0
31
87
0
88
29
16
6
48
1.70
4938--5213
138
2.0
137
96
0
507
37
11
5
45
1.63
7514--7565
25
2.1
26
78
10
63
73
0
21
5
1.04
18791--18817
6
4.5
6
100
0
54
55
14
0
29
1.40
19767--19802
10
3.6
10
100
0
72
22
8
19
50
1.74
25603--25658
25
2.4
23
88
8
78
28
12
7
51
1.65
26035--26067
17
1.9
17
88
11
50
63
12
6
18
1.48
26970--26997
10
2.8
10
100
0
56
21
10
17
50
1.77
28171--28211
7
5.7
7
97
2
73
31
0
0
68
0.90
28199--28502
150
2.0
150
95
0
545
31
15
19
33
1.92
29256--29413
86
1.8
86
82
2
201
30
13
21
34
1.92
30099--30125
2
13.5
2
100
0
54
48
0
0
51
1.00
31397--31581
38
4.9
38
93
0
309
23
35
20
21
1.96
33779--34001
38
5.9
38
90
2
333
23
35
18
22
1.96
33779--33999
77
2.9
76
90
2
347
23
35
18
22
1.96

Tables:   1

The End!