Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013927.1 Corchorus capsularis cultivar CVL-1 contig13948, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18163

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3748--4775
438
2.4
437
83
4
1268
31
13
13
42
1.82
3748--4789
439
2.4
437
82
4
1271
31
13
12
42
1.82
5135--5173
15
2.6
15
79
0
51
38
2
2
56
1.27
5144--5187
23
2.0
22
90
4
70
36
2
4
56
1.32
5145--5197
22
2.3
23
87
3
72
37
1
5
54
1.35
5660--5690
6
5.2
6
100
0
62
32
32
35
0
1.58
15644--16177
22
24.6
22
69
12
214
35
15
9
39
1.80
15774--15859
45
1.9
45
83
4
111
38
16
11
33
1.85
16258--16512
22
11.6
22
71
13
118
33
14
9
41
1.79
16535--16674
22
6.4
21
72
13
97
37
18
7
36
1.80
16765--16870
45
2.4
45
85
7
137
35
13
14
36
1.85
16764--16884
43
2.7
43
81
12
136
34
15
13
36
1.87
16710--16916
22
9.3
22
76
12
154
38
18
9
33
1.83
18071--18135
30
2.1
31
91
2
105
50
6
16
26
1.68

Tables:   1

The End!