Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013934.1 Corchorus capsularis cultivar CVL-1 contig13955, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15502

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
28--108
39
2.1
39
81
4
92
12
37
9
40
1.76
2178--2217
21
1.9
21
85
10
55
37
15
15
32
1.88
2912--2954
13
3.4
13
80
6
52
9
9
11
69
1.36
5317--5341
10
2.5
10
100
0
50
40
24
8
28
1.83
5803--5838
18
2.1
17
94
5
63
11
16
8
63
1.49
8504--8562
25
2.7
20
72
22
64
30
20
25
23
1.98
12570--12605
19
1.9
18
88
5
54
41
2
22
33
1.68

Tables:   1

The End!