Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013935.1 Corchorus capsularis cultivar CVL-1 contig13956, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16075

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
241--276
19
1.9
18
88
5
54
41
2
22
33
1.68
6277--6306
14
2.1
14
93
0
51
0
30
0
70
0.88
6284--6318
17
2.1
17
88
0
52
0
22
0
77
0.78
6273--6335
24
2.7
24
85
7
76
1
22
0
76
0.88
6283--6339
15
3.7
14
82
15
60
1
17
0
80
0.79
6290--6366
24
3.1
25
82
14
81
5
16
0
77
0.94
6301--6346
14
3.1
14
84
9
56
4
13
0
82
0.81
6307--6371
23
2.8
23
80
11
69
7
13
0
78
0.95
6422--6703
47
6.0
47
88
0
368
30
21
26
21
1.98
6838--7378
69
7.9
69
82
6
573
27
18
26
26
1.98
6838--7378
137
3.9
138
84
4
641
27
18
26
26
1.98
6907--7399
67
7.2
66
79
7
420
27
18
27
26
1.98
8604--8650
24
2.0
24
87
8
69
19
19
0
61
1.34
10538--10573
19
1.9
18
88
5
54
33
22
2
41
1.68

Tables:   1

The End!