Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013946.1 Corchorus capsularis cultivar CVL-1 contig13967, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6543

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
267--305
20
1.9
19
85
10
51
74
2
15
7
1.15
5507--5557
23
2.3
22
93
6
86
39
7
19
33
1.81
5575--5622
13
3.6
14
80
5
55
29
12
14
43
1.82
5900--5943
12
3.9
11
82
11
54
72
11
0
15
1.11
5902--5947
22
2.1
21
88
11
67
76
10
0
13
1.03
6211--6239
13
2.2
13
100
0
58
34
0
20
44
1.52
6268--6297
16
1.9
15
93
6
51
76
0
13
10
1.01

Tables:   1

The End!