Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013947.1 Corchorus capsularis cultivar CVL-1 contig13968, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6218

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3615--3644
9
3.4
9
90
9
53
73
0
13
13
1.10
3732--3787
17
3.7
15
81
13
62
44
7
8
39
1.63
3746--3787
14
3.0
14
76
13
50
42
7
9
40
1.65
3750--3794
13
3.2
14
81
9
56
35
6
11
46
1.66
4077--4136
23
2.6
22
84
10
68
76
8
0
15
1.00
4086--4134
18
2.6
19
80
6
55
75
8
0
16
1.03
4417--4445
13
2.2
13
100
0
58
34
0
20
44
1.52
6052--6126
22
3.3
22
69
10
69
28
32
17
22
1.96
6048--6140
47
2.0
47
91
4
152
29
26
17
26
1.97

Tables:   1

The End!