Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013951.1 Corchorus capsularis cultivar CVL-1 contig13972, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10095

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
766--834
24
2.9
23
79
16
70
17
13
8
60
1.56
4449--4482
17
2.1
16
88
5
50
55
8
5
29
1.54
6126--6217
34
2.7
34
86
10
125
21
29
21
27
1.99
6344--6415
35
2.0
36
86
2
101
20
18
19
41
1.90
6473--6715
107
2.3
107
78
6
251
20
18
25
35
1.95
6986--7040
26
2.1
26
86
0
74
18
16
23
41
1.89
9531--9572
21
2.0
22
85
4
59
40
0
14
45
1.45
9511--9889
51
7.5
50
76
10
306
41
3
14
40
1.62
9664--9750
30
3.2
29
64
32
75
41
1
13
43
1.52
9683--9722
20
2.0
21
90
5
64
42
2
15
40
1.60

Tables:   1

The End!