Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013952.1 Corchorus capsularis cultivar CVL-1 contig13973, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22168

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
940--1219
64
4.3
64
81
9
314
36
15
23
24
1.94
4889--4956
27
2.5
27
83
4
84
26
13
23
36
1.92
4889--4965
27
2.9
27
82
7
77
25
12
24
36
1.92
6633--6799
84
2.0
84
83
2
210
33
14
28
23
1.94
9394--9469
27
2.8
26
82
7
89
28
13
23
34
1.92
12159--12192
11
3.2
10
84
15
50
50
17
2
29
1.61
13283--13329
24
2.0
24
87
8
69
55
19
4
21
1.60
18643--18676
11
3.2
10
84
15
50
50
17
2
29
1.61
19740--19770
16
1.9
16
93
0
53
6
16
29
48
1.70

Tables:   1

The End!