Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013954.1 Corchorus capsularis cultivar CVL-1 contig13975, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26245

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4059--4118
30
2.0
30
83
6
77
33
16
6
43
1.74
5792--5853
28
2.3
27
81
13
74
54
1
0
43
1.09
5801--5858
8
6.3
9
77
18
50
53
1
0
44
1.10
5817--5858
17
2.4
18
80
7
52
54
0
0
45
0.99
9169--9197
12
2.3
13
94
5
51
89
0
10
0
0.48
17574--17680
31
3.6
29
84
5
124
32
19
13
34
1.90
19042--19165
24
5.2
24
80
5
99
31
3
37
27
1.73
19063--19211
24
6.2
24
76
6
133
34
3
37
24
1.72
19403--19444
12
3.5
12
83
0
57
38
2
35
23
1.68

Tables:   1

The End!