Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013955.1 Corchorus capsularis cultivar CVL-1 contig13976, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17181

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4975--5041
21
3.1
21
83
8
89
34
14
0
50
1.44
4971--5039
23
3.1
23
83
8
97
33
14
0
52
1.42
5446--5475
6
5.0
6
95
0
51
3
13
0
83
0.77
6220--6253
14
2.2
16
90
10
54
58
11
14
14
1.63
6722--6791
33
2.1
33
84
5
88
18
25
37
18
1.94
6871--6942
31
2.3
32
82
2
92
13
36
33
16
1.89
7123--7166
21
2.1
21
86
0
61
36
11
29
22
1.89
12838--12917
33
2.4
33
83
4
99
15
27
45
12
1.82

Tables:   1

The End!