Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013956.1 Corchorus capsularis cultivar CVL-1 contig13977, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32216

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
308--392
33
2.6
32
75
10
109
29
22
20
28
1.98
3015--3097
39
2.2
36
81
14
89
37
32
9
20
1.85
11137--11189
10
5.0
10
73
13
52
5
22
45
26
1.74
16517--16620
16
6.6
16
73
9
70
9
16
37
36
1.81
17633--17675
16
2.7
16
81
0
59
9
16
39
34
1.80
24804--24888
22
3.9
22
93
0
143
17
23
36
22
1.95
25081--25202
43
2.8
43
96
1
217
25
16
25
32
1.96
29623--29708
22
3.9
22
93
3
147
15
23
38
23
1.92
29859--29925
22
3.0
22
78
8
80
17
20
34
26
1.96
29859--29918
24
2.6
23
84
5
77
16
18
36
28
1.93

Tables:   1

The End!