Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01001396.1 Corchorus capsularis cultivar CVL-1 contig01396, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6080

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
123--214
22
4.2
20
70
13
58
44
14
9
31
1.77
2699--2753
3
18.7
3
88
7
78
27
0
0
72
0.85
2795--2946
76
2.0
76
98
0
295
21
23
18
37
1.94
2951--3036
43
2.0
43
100
0
172
18
16
32
32
1.93
3949--3982
14
2.3
15
95
5
61
64
0
29
5
1.17
5830--5909
13
6.1
13
75
2
61
27
26
12
33
1.92

Tables:   1

The End!