Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013962.1 Corchorus capsularis cultivar CVL-1 contig13983, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32190

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4113--4249
72
1.9
72
83
0
175
34
16
27
21
1.95
7452--7751
80
3.7
80
78
9
295
49
18
3
29
1.64
7636--7683
20
2.5
19
76
6
51
58
12
4
25
1.52
7713--7750
20
1.9
20
88
0
58
50
7
5
36
1.54
12885--12909
13
1.9
13
100
0
50
0
4
8
88
0.64
14150--14183
14
2.4
14
95
0
59
50
14
11
23
1.76
14861--15050
47
4.0
47
88
0
263
36
18
23
21
1.95
15161--15595
70
6.3
70
81
4
461
27
19
27
25
1.98
15161--15595
139
3.1
140
87
4
596
27
19
27
25
1.98
15840--15895
29
1.9
29
100
0
112
32
7
21
39
1.80
16472--16508
13
2.9
12
92
8
56
2
18
0
78
0.87
16472--16508
6
5.8
6
87
12
56
2
18
0
78
0.87
16472--16508
19
1.9
19
94
0
65
2
18
0
78
0.87
16473--16514
19
2.2
19
86
0
57
4
21
0
73
1.01
17723--17807
15
5.6
15
68
25
54
4
20
0
75
0.98
17768--17806
16
2.3
18
83
16
57
2
20
0
76
0.90
17717--17794
22
3.5
21
76
16
70
3
20
0
75
0.95
18269--18300
16
2.0
16
93
0
55
34
12
15
37
1.85
29588--29672
29
2.8
30
80
10
93
23
18
14
43
1.87

Tables:   1

The End!