Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013969.1 Corchorus capsularis cultivar CVL-1 contig13990, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17061

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
21--55
10
3.7
9
88
11
52
11
2
0
85
0.69
1069--1142
33
2.2
33
80
4
87
8
24
44
22
1.80
1115--1165
23
2.2
23
96
0
93
11
29
39
19
1.87
4231--4310
33
2.4
33
89
4
117
46
17
10
26
1.79
4335--4431
33
2.9
32
78
6
104
44
21
10
23
1.83
9088--9116
11
2.6
11
100
0
58
13
0
0
86
0.58
9088--9125
12
3.2
12
92
7
60
15
0
0
84
0.63
10938--11015
30
2.5
31
87
8
113
23
10
23
43
1.84
11502--11534
18
1.9
17
88
11
50
42
24
0
33
1.55
12528--12635
33
3.3
33
81
5
121
23
40
26
9
1.84

Tables:   1

The End!