Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013970.1 Corchorus capsularis cultivar CVL-1 contig13991, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28807

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4583--4616
8
4.1
8
85
7
50
23
2
14
58
1.50
5598--5661
33
1.9
33
87
0
92
10
29
35
23
1.89
9823--9929
33
3.2
33
84
7
128
7
28
39
24
1.82
16326--16422
30
3.1
30
76
16
99
24
39
26
9
1.86
22119--22152
8
4.1
8
85
7
50
58
14
2
23
1.50
23601--23710
33
3.3
33
79
5
132
31
11
17
39
1.86
23600--23723
66
1.9
66
93
0
212
29
11
19
40
1.86
23617--23719
33
3.1
33
81
5
136
26
10
19
43
1.83
23599--23736
66
2.1
66
87
0
204
28
10
19
40
1.85
23761--23810
24
2.1
23
81
3
55
40
8
12
40
1.72

Tables:   1

The End!