Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013972.1 Corchorus capsularis cultivar CVL-1 contig13993, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6663

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
735--1087
43
8.4
43
72
16
224
17
22
6
53
1.66
719--1100
21
18.2
21
67
19
133
17
21
6
54
1.65
962--1088
65
2.0
65
82
6
159
19
21
6
52
1.67
1174--1214
14
2.9
14
81
3
55
21
14
4
58
1.55
1201--1254
26
2.1
26
93
6
92
27
14
3
53
1.58
1207--1262
26
2.2
26
87
6
78
26
17
3
51
1.62
2216--2471
51
5.0
49
75
8
237
35
14
4
44
1.67
2215--2471
101
2.5
101
88
2
381
35
14
4
44
1.66
2458--2516
20
3.0
20
94
0
100
33
16
13
35
1.88
3208--3256
26
1.9
26
84
12
66
71
8
20
0
1.11
5001--5070
27
2.6
27
93
0
113
45
22
15
15
1.84
6276--6302
14
1.9
14
100
0
54
22
18
7
51
1.70
6276--6405
35
3.7
35
76
14
106
18
19
5
56
1.60
6403--6456
22
2.5
22
81
3
65
22
24
1
51
1.57

Tables:   1

The End!