Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013982.1 Corchorus capsularis cultivar CVL-1 contig14003, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52138

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4449--4495
24
2.0
23
84
12
60
14
8
4
72
1.24
4811--4849
14
2.8
13
81
11
51
46
2
7
43
1.46
6013--6048
19
1.9
18
88
5
54
41
2
22
33
1.68
13052--13215
31
5.5
31
76
12
128
34
24
25
15
1.95
13120--13167
24
2.0
24
87
0
69
37
27
20
14
1.92
14881--14989
55
2.0
54
96
1
200
47
3
21
27
1.67
17194--17255
31
2.0
31
87
0
88
29
19
6
45
1.75
19802--19835
17
2.0
17
100
0
68
47
5
11
35
1.65
24555--24679
61
2.1
59
86
3
169
44
7
16
32
1.74
24555--24646
31
3.0
31
70
9
89
39
6
16
38
1.74
24568--24693
61
2.1
60
81
8
141
43
7
15
33
1.74
37465--37498
11
3.1
11
95
0
59
20
41
0
38
1.53
37858--37888
15
2.1
15
100
0
62
25
25
25
22
2.00

Tables:   1

The End!