Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013986.1 Corchorus capsularis cultivar CVL-1 contig14007, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25218

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
937--989
27
2.0
27
85
7
74
39
9
1
49
1.46
3896--3933
16
2.4
16
82
4
51
7
13
36
42
1.73
6016--6041
1
26.0
1
100
0
52
0
0
0
100
0.00
7671--7737
34
1.9
35
84
3
91
32
5
37
23
1.79
14610--14759
32
4.7
32
93
3
241
30
38
22
8
1.84
14595--14761
16
10.5
15
78
16
144
29
40
22
7
1.82
15165--15278
57
2.0
58
89
1
176
38
13
23
24
1.90
21583--21685
50
2.1
49
92
5
172
41
11
9
36
1.74
23569--23613
23
2.0
23
86
0
63
4
42
6
46
1.50

Tables:   1

The End!