Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013988.1 Corchorus capsularis cultivar CVL-1 contig14009, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16578

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
39--82
2
23.0
2
90
9
74
50
0
0
50
1.00
1035--1309
109
2.5
109
92
4
446
48
1
11
38
1.50
1544--1580
13
2.8
13
87
0
56
16
43
8
32
1.77
10975--11001
3
9.0
3
100
0
54
33
33
0
33
1.58
13514--13547
2
18.0
2
88
11
54
50
0
0
50
1.00
13721--13803
42
2.0
43
83
7
107
34
21
18
25
1.96

Tables:   1

The End!