Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013996.1 Corchorus capsularis cultivar CVL-1 contig14017, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20826

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
870--926
20
2.8
21
89
2
80
31
14
1
52
1.51
3043--3084
2
20.5
2
90
4
66
47
2
2
47
1.28
3770--3840
34
2.1
34
97
0
133
19
26
1
52
1.55
5049--5166
58
2.0
58
98
0
227
50
1
3
44
1.28
5068--5163
32
3.2
32
67
17
96
53
2
2
42
1.24
8384--8466
6
13.5
6
75
9
69
59
3
1
36
1.23
8384--8469
28
3.1
28
71
15
88
58
3
1
37
1.23
16684--16714
2
16.0
2
93
6
55
48
0
0
51
1.00
18293--18420
60
2.1
59
81
7
150
30
14
17
38
1.89
18618--18650
17
1.9
17
93
0
57
36
15
3
45
1.61
18708--18924
109
2.0
107
89
3
328
45
7
11
35
1.69
19657--19715
31
1.9
31
92
0
100
44
1
18
35
1.60

Tables:   1

The End!