Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014000.1 Corchorus capsularis cultivar CVL-1 contig14021, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27254

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2722--2765
20
2.2
20
84
8
54
40
4
2
52
1.34
2739--2771
11
3.0
11
90
0
57
39
0
0
60
0.97
2729--2780
25
2.0
28
81
11
65
38
5
1
53
1.36
14524--14568
22
2.0
22
100
0
90
26
11
26
35
1.90
15042--15167
42
2.9
43
78
4
148
53
15
9
21
1.71
19137--19272
16
8.6
16
81
4
168
9
20
36
33
1.85
20088--20222
16
8.4
16
76
9
132
8
20
38
32
1.82
20088--20240
48
3.2
47
79
9
123
8
20
39
32
1.82
20086--20222
32
4.3
32
85
5
170
8
21
37
32
1.82
20260--20310
25
2.0
27
88
7
79
3
13
56
25
1.54
21395--21436
20
2.1
21
86
8
61
28
7
7
57
1.52

Tables:   1

The End!