Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014006.1 Corchorus capsularis cultivar CVL-1 contig14027, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33914

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
289--355
31
2.1
32
81
10
84
46
4
17
31
1.68
296--361
31
2.1
31
86
5
89
46
4
21
27
1.70
7287--7324
18
2.1
18
100
0
76
26
13
31
28
1.93
12176--12249
36
2.1
36
97
0
139
18
22
16
41
1.89
14132--14225
30
3.0
30
84
4
125
28
21
21
28
1.98
14956--15021
12
5.5
12
92
0
114
42
7
31
18
1.78
19393--19417
13
1.9
13
100
0
50
40
0
28
32
1.57
22373--22426
12
4.4
12
86
4
63
33
16
20
29
1.95
22685--22760
31
2.5
30
81
12
84
38
19
11
30
1.88
28145--28289
67
2.2
65
85
8
186
50
14
19
15
1.78
29039--29085
16
2.9
16
100
0
94
38
19
25
17
1.92
32154--32186
15
2.2
15
94
0
57
24
15
6
54
1.63

Tables:   1

The End!