Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014010.1 Corchorus capsularis cultivar CVL-1 contig14031, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35739

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
17251--17377
31
4.4
31
74
17
128
16
22
27
33
1.95
17268--17370
53
1.9
53
88
0
152
16
19
27
36
1.93
19810--19900
36
2.6
35
92
5
148
45
23
9
21
1.82
24002--24038
2
18.5
2
89
10
58
48
0
2
48
1.15
24189--24263
2
38.5
2
77
15
77
48
0
6
45
1.29
24189--24243
9
5.7
10
77
14
53
49
0
7
43
1.30
31814--31849
2
18.0
2
100
0
72
50
0
0
50
1.00
31987--32046
31
1.9
31
89
0
93
20
33
11
35
1.88
33567--33597
2
16.0
2
93
6
55
48
0
0
51
1.00
34511--34537
1
27.0
1
100
0
54
100
0
0
0
0.00

Tables:   1

The End!