Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014013.1 Corchorus capsularis cultivar CVL-1 contig14034, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20714

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7--50
2
22.0
2
100
0
88
50
0
0
50
1.00
1871--1926
21
2.8
19
83
5
67
30
19
10
39
1.86
1878--1926
19
2.5
20
86
6
64
30
20
12
36
1.89
2289--2317
2
14.5
2
100
0
58
48
0
0
51
1.00
8130--8159
15
1.9
16
93
6
53
70
0
3
26
1.03
15761--15994
72
3.3
71
76
11
176
41
6
19
32
1.77
15831--16008
72
2.5
72
78
10
188
43
7
19
29
1.78
17249--17283
18
2.0
18
94
5
63
51
22
0
25
1.48
17689--17747
29
2.0
29
86
6
82
45
3
13
37
1.60
20096--20121
13
2.0
13
100
0
52
15
38
7
38
1.76

Tables:   1

The End!