Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014028.1 Corchorus capsularis cultivar CVL-1 contig14049, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17702

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1337--1449
32
3.5
32
84
4
147
24
18
22
34
1.96
2167--2243
34
2.3
34
95
0
136
45
14
14
25
1.82
4376--4980
124
4.9
123
87
4
763
39
14
14
31
1.86
7506--7535
16
1.9
15
93
6
51
73
10
10
6
1.25
8075--8135
30
2.0
30
87
6
88
34
16
4
44
1.69
13181--13234
25
2.2
25
82
0
63
40
5
11
42
1.64
13193--13242
25
2.0
25
100
0
100
32
4
12
52
1.57
13816--13855
21
1.9
21
84
0
53
17
25
25
32
1.97
15297--15324
2
14.0
2
100
0
56
0
0
50
50
1.00

Tables:   1

The End!