Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014029.1 Corchorus capsularis cultivar CVL-1 contig14050, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6352

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
216--265
24
2.1
24
92
0
82
44
6
6
44
1.53
1520--1572
21
2.5
21
85
14
74
32
32
28
7
1.85
3870--3908
19
2.1
19
100
0
78
28
30
15
25
1.96
4719--4876
49
3.2
49
80
13
130
40
5
17
37
1.71
4763--4926
51
3.3
51
84
10
180
43
5
13
37
1.67
4925--5122
51
3.9
51
78
10
192
39
3
17
39
1.65
4914--5109
101
1.9
101
85
6
272
39
3
17
39
1.67
5128--5287
51
3.1
51
84
1
205
43
5
15
36
1.69
5247--5286
21
1.9
21
90
10
64
47
7
12
32
1.69
5969--6352
41
9.5
41
81
5
408
16
27
19
36
1.93
5959--6352
81
4.8
82
79
6
401
16
27
19
36
1.93
5969--6352
122
3.2
120
83
4
459
16
27
19
36
1.93

Tables:   1

The End!