Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014042.1 Corchorus capsularis cultivar CVL-1 contig14063, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17600

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--26
2
13.0
2
100
0
52
50
0
0
50
1.00
8195--8490
109
2.7
109
92
4
459
37
10
1
50
1.48
10264--10305
23
1.9
21
85
9
57
26
19
4
50
1.67
11053--11126
31
2.4
32
90
4
116
39
17
13
29
1.88
12051--12117
33
2.0
33
82
0
80
17
41
23
16
1.89
16300--16695
211
1.9
211
91
1
659
33
10
8
47
1.69
16874--17259
137
2.8
137
84
6
465
43
9
12
35
1.74
17120--17438
167
1.9
166
83
3
417
43
10
12
33
1.76

Tables:   1

The End!