Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014045.1 Corchorus capsularis cultivar CVL-1 contig14066, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14447

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
349--392
6
7.7
6
85
10
65
0
2
15
81
0.78
349--395
11
4.2
11
91
2
76
0
2
17
80
0.80
349--392
17
2.6
16
86
10
61
0
2
15
81
0.78
338--395
22
2.7
22
84
12
77
0
5
17
77
0.94
7994--8043
24
2.1
24
100
0
100
28
34
4
34
1.76
9490--9625
68
2.0
68
94
2
238
41
13
14
29
1.85
14410--14447
2
19.0
2
100
0
76
50
0
0
50
1.00

Tables:   1

The End!