Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014052.1 Corchorus capsularis cultivar CVL-1 contig14073, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15224

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
372--414
18
2.4
18
88
0
59
41
2
16
39
1.61
381--421
12
3.4
12
82
0
55
46
0
14
39
1.45
381--421
18
2.3
18
91
0
64
46
0
14
39
1.45
4481--4537
28
2.0
29
93
3
98
22
22
14
40
1.90
5229--5309
29
2.7
30
86
3
110
37
11
24
27
1.89
5451--5490
17
2.4
16
83
4
53
42
42
10
5
1.60
6157--6192
12
3.0
12
92
8
56
36
16
0
47
1.47
6159--6192
11
3.0
11
91
8
59
35
17
0
47
1.48
7034--7072
20
1.9
20
89
5
60
12
10
5
71
1.28
15003--15044
15
2.8
15
96
0
75
16
26
11
45
1.82
15188--15224
2
18.5
2
94
0
65
48
2
0
48
1.15

Tables:   1

The End!