Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014054.1 Corchorus capsularis cultivar CVL-1 contig14075, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  36652

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--42
2
21.5
2
85
4
59
45
2
2
50
1.27
88--126
14
2.7
15
88
8
62
53
5
0
41
1.23
754--787
18
1.9
17
88
5
50
50
17
11
20
1.77
5590--5630
16
2.6
16
92
0
64
4
24
48
21
1.69
7584--7661
38
2.1
38
90
2
122
2
46
3
47
1.34
10545--11005
166
2.8
165
80
6
554
35
16
16
31
1.91
21271--21315
19
2.4
19
92
0
72
44
46
2
6
1.42
21716--21776
18
3.4
17
72
17
52
32
4
19
42
1.73
21728--21792
18
3.6
18
78
0
85
33
3
20
43
1.67
24822--24853
2
17.0
2
87
12
50
53
0
0
46
1.00
25297--25353
15
3.9
14
80
11
69
26
33
12
28
1.92
29622--29653
2
16.0
2
93
0
55
50
3
0
46
1.17
30341--30398
25
2.4
25
82
8
66
63
5
3
27
1.31
31558--31652
29
3.2
29
68
19
86
52
0
10
36
1.36
31927--31982
25
2.2
25
90
0
85
33
23
10
32
1.89
35238--35267
13
2.4
13
94
5
53
26
26
20
26
1.99

Tables:   1

The End!