Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014056.1 Corchorus capsularis cultivar CVL-1 contig14077, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31080

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--29
2
14.5
2
100
0
58
48
0
0
51
1.00
9974--10044
23
2.9
24
69
23
67
23
22
18
35
1.96
27322--27401
27
3.1
27
68
14
87
36
6
21
36
1.79
27308--27383
23
3.1
23
68
14
71
35
5
22
36
1.77
29565--29623
31
1.9
31
89
0
91
32
16
5
45
1.70
29554--30051
248
2.0
248
99
0
978
35
13
8
42
1.75
30006--30085
40
2.0
40
100
0
160
40
7
12
40
1.71

Tables:   1

The End!