Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014057.1 Corchorus capsularis cultivar CVL-1 contig14078, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19024

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6868--6928
24
2.3
26
81
16
81
37
31
0
31
1.58
6994--7101
34
3.1
33
79
16
126
47
12
12
28
1.76
6994--7106
39
3.1
38
86
7
153
46
12
11
29
1.76
11005--11104
2
54.0
2
69
21
58
45
5
1
49
1.31
11005--11103
51
1.9
51
83
8
128
44
5
1
49
1.31
11105--11151
24
1.9
24
83
12
60
53
8
0
38
1.32
11766--11797
4
8.0
4
100
0
64
0
25
0
75
0.81
12225--12264
13
3.1
13
85
0
53
45
15
15
25
1.84
12257--12299
21
2.0
22
86
4
61
37
4
20
37
1.74
12627--12824
41
4.8
41
80
5
231
36
16
13
33
1.88
14071--14172
50
2.0
50
98
0
195
31
8
23
36
1.86
14674--14749
35
2.2
35
79
6
84
32
3
11
51
1.57
16394--16531
69
2.0
69
98
0
267
28
9
14
47
1.75
17444--17484
19
2.2
19
100
0
82
46
14
0
39
1.45
17764--17818
27
2.0
27
96
0
101
18
14
12
54
1.71

Tables:   1

The End!