Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014068.1 Corchorus capsularis cultivar CVL-1 contig14089, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28140

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
746--879
62
2.2
61
87
5
189
52
14
18
14
1.75
1616--1650
16
2.2
16
100
0
70
45
17
25
11
1.81
2611--2645
16
2.2
16
100
0
70
45
17
25
11
1.81
5211--5245
2
17.5
2
87
0
52
48
0
5
45
1.26
18779--19028
129
1.9
129
94
1
439
34
18
18
28
1.95
19403--19447
4
11.8
4
90
9
76
51
24
0
24
1.49
21718--21776
31
1.9
30
82
3
73
40
6
5
47
1.52
22349--22381
2
17.5
2
87
12
52
51
0
0
48
1.00

Tables:   1

The End!