Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014070.1 Corchorus capsularis cultivar CVL-1 contig14091, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25923

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
196--227
6
5.5
6
96
3
57
0
0
12
87
0.54
2502--2527
7
3.7
7
100
0
52
42
26
30
0
1.56
16732--16807
36
2.1
36
90
4
118
13
19
27
39
1.89
16732--16807
18
4.2
18
80
9
84
13
19
27
39
1.89
16948--17005
18
3.2
18
73
9
55
15
20
27
36
1.93
16750--17129
198
1.9
198
96
0
697
19
24
20
35
1.96
19030--19091
29
2.1
30
84
3
81
8
37
0
54
1.30
20014--20962
290
3.3
286
91
3
1442
38
10
14
35
1.81

Tables:   1

The End!