Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014079.1 Corchorus capsularis cultivar CVL-1 contig14100, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29063

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8773--8827
15
3.5
15
83
9
74
16
7
36
40
1.76
8766--8834
32
2.2
32
94
0
120
13
7
40
39
1.72
8773--8834
16
3.9
16
81
10
74
14
8
37
40
1.76
8773--8844
32
2.2
32
90
0
108
12
8
37
41
1.73
8982--9104
16
7.7
16
79
3
131
4
13
30
51
1.61
8982--9103
32
3.8
32
93
0
208
4
12
31
51
1.60
8990--9122
64
2.1
64
84
2
178
5
13
33
47
1.65
13874--13919
22
2.1
22
87
0
65
39
13
10
36
1.79
13920--13977
22
2.6
22
83
0
71
32
12
18
36
1.88
13947--14050
22
4.7
22
73
21
76
39
8
11
40
1.72
14081--14311
22
10.4
22
66
17
70
39
7
16
36
1.76
14190--14311
44
2.8
44
75
13
142
40
9
14
36
1.78
14192--14334
22
6.6
21
75
10
119
39
7
17
34
1.78
14478--14529
22
2.4
22
83
0
68
36
13
3
46
1.62
18219--18253
13
2.8
13
91
4
54
54
8
0
37
1.31
19895--19944
25
2.0
25
88
4
73
40
8
0
52
1.31
19934--19996
29
2.2
29
97
2
119
33
19
0
47
1.49
28209--28252
16
2.7
17
86
13
58
27
11
4
56
1.53

Tables:   1

The End!